Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015907838.1_cds_XP_016457936.1_51609
CDS Infomation

[gene=LOC107781711] [db_xref=GeneID:107781711] [protein=F-box protein SKIP22-like] [protein_id=XP_016457936.1] [location=join(70158..71514,72351..72538)] [gbkey=CDS]
Sequence

ATGAAACTCAGAATCAGATGCTTCGAAACCAAAGAAACCCTAAAAATCGACATACCGTCT
TCTTCTTGCACTCTTCATGAACTGAAACAACGCATCTCTCAGTCAATTCCATCTTCATCT
TCATCGAATTCCATTCATCTTTCTCTCAACGGAAAGGACGACCTTTCACCCTCTGAAGAG
ACGCTTCAATCCTTTGGTATTACCTCCGGTGACCTTATCTTCTTCACTTTCAAGCCAAAT
GGGTTTTCAGTTTCAACTAAAACCCATATCCCCAAATCTCAACCCATCAAATTGGACACT
CAAATTATCCAAAAACCTGAAACAATGAAAAAATTGGACACCCAAATTATCCAGGAATCT
GAGACGAAACCCGTAAATTCGATACTTGAGGGAGAGGAAGCGGAAGAGTTTATGGAGGTC
GATTACAGTGACATGTCAGTTGATGTGAATATGACGAAGTCGTTTCCTGTACCTGGATTT
TTGAGGAAAGTGTTCACGGATGAGCTGAGCGATGACGGCGGCCGTGACCATAAGCTGTTG
GTGGTTGCGCTTCACGCTGTTTTTGTAGAATCTGGGTTTGTTCTCCTTGACCCTGTTTCC
TTTACTCAACTTAGTGGATCCCAGTTTTGGAAATGTTATTGGCCTTCGGGTGCTTCACCT
TCTCGAATGACTCTGTTTTACACCCTGCCTGAGGCGGCTATTCATCATAGGGTTGAATTG
AAGTTTCATTGTTTAGGGAAGTTTTTTATTGCTCACGGGTCATTGTCTGGTGGTGTTTCC
ACACGTAGAGTTACATTGAATGAGGATCAGTTGGTTCCGTTCTTGAATGTTGTGTGGGCT
AACTGTGGATTACATGAGGAAGTAAATAATGGGGCTTTTGGGACTTGTCCGGAGAGGGAA
GTGTTTCAGTTTTGGAGGAACGTGAAGGATGGGCTTGTGTTGCCATTGCTGATTGATTTG
TGTGACAAGTCTGGTTTGGAGCTTCCACCGTGCTTTATGCGACTTCCCACTGACCTTAAG
TTGAAGATTTTGGAGTTGCTACCCGGTGTTGAGATAGCCAAAGTGAGTTGTCTGAGCTCT
GAATTGCGATATTTGGCTTTGAGTGATGATCTGTGGAAGAAGAAGTATGTGGAGCAGTTT
GGTGATGCCAACACATCGGGAGGAGGGGACGAGGGACATTGGAAAGACAAGTTTGTCAAG
TCTTGGGAGAGTAGGAAGAGAAGGAAGATGATAAGCAGAAGAAGAGTGGTTGATCCCCTG
AGATTTTTAGGGGGTCCTAATCCATTCCCAGGACCTTGGAGGCCACATATAATTGGTGGA
GATTATGATCTATTGCCTCCACAGTTTGATAATACCGTGAGTTGGATTATTTTTCTGTCC
TCTTCTTTGGTTTGTGTTTTGGGACTTTTGGCCTTTGAATATGCTTTCAAGCTCCTTGCT
GCTATAGTTGGTACTCATAAAACTGAGATAGTTAAAGGTAGAGACGGGTGCCTGGATCTA
CCCCACAAATGGTGGGAATTTGGTGAGGATGGAGAAGTTCAGTAG

Peptide Sequence

PEP ID

XP_016457936.1
PEP Infomation

PREDICTED: F-box protein SKIP22-like [Nicotiana tabacum]
Sequence

MKLRIRCFETKETLKIDIPSSSCTLHELKQRISQSIPSSSSSNSIHLSLNGKDDLSPSEE
TLQSFGITSGDLIFFTFKPNGFSVSTKTHIPKSQPIKLDTQIIQKPETMKKLDTQIIQES
ETKPVNSILEGEEAEEFMEVDYSDMSVDVNMTKSFPVPGFLRKVFTDELSDDGGRDHKLL
VVALHAVFVESGFVLLDPVSFTQLSGSQFWKCYWPSGASPSRMTLFYTLPEAAIHHRVEL
KFHCLGKFFIAHGSLSGGVSTRRVTLNEDQLVPFLNVVWANCGLHEEVNNGAFGTCPERE
VFQFWRNVKDGLVLPLLIDLCDKSGLELPPCFMRLPTDLKLKILELLPGVEIAKVSCLSS
ELRYLALSDDLWKKKYVEQFGDANTSGGGDEGHWKDKFVKSWESRKRRKMISRRRVVDPL
RFLGGPNPFPGPWRPHIIGGDYDLLPPQFDNTVSWIIFLSSSLVCVLGLLAFEYAFKLLA
AIVGTHKTEIVKGRDGCLDLPHKWWEFGEDGEVQ

Transcript Sequence

Gene sequence data has not been registered.